Pinned Repositories
auto_rifdock
cryolo_stars2star
Convert crYOLO star files to a star file compatible with cryoSPARC.
DALI_prepare
The script for preparing the databases for local version of DALI that is a program for comparing protein structures in 3D.
fetch_af
Directly open PDB files from AlphaFold database using PyMOL.
gmx_makecyclictop
This script makes a cyclic peptide or cyclic nucleotide topology file for GROMACS out of (specially prepared) linear molecule topology file
hole2_docker
models_repo
models_repo
pymol-color-alphafold
PyMOL extension to color AlphaFold structures by confidence (pLDDT).
pymol-psico
Pymol ScrIpt COllection (PSICO)
pymolplugin
Directory of pymol plugins
jongseo-park's Repositories
jongseo-park/auto_rifdock
jongseo-park/cryolo_stars2star
Convert crYOLO star files to a star file compatible with cryoSPARC.
jongseo-park/DALI_prepare
The script for preparing the databases for local version of DALI that is a program for comparing protein structures in 3D.
jongseo-park/fetch_af
Directly open PDB files from AlphaFold database using PyMOL.
jongseo-park/gmx_makecyclictop
This script makes a cyclic peptide or cyclic nucleotide topology file for GROMACS out of (specially prepared) linear molecule topology file
jongseo-park/hole2_docker
jongseo-park/models_repo
models_repo
jongseo-park/pymol-color-alphafold
PyMOL extension to color AlphaFold structures by confidence (pLDDT).
jongseo-park/pymol-psico
Pymol ScrIpt COllection (PSICO)
jongseo-park/pymolplugin
Directory of pymol plugins
jongseo-park/REINVENT4
AI molecular design tool for de novo design, scaffold hopping, R-group replacement, linker design and molecule optimization.
jongseo-park/SCASA
Python module for the calculation of shape complementarity