jordanc17

Graduate student in the Setty lab at Fred Hutch.

Seattle, WA

Pinned Repositories

AdaptiveKDE
Python module for adaptive kernel density estimation
Language:Python00
CoolBox
Jupyter notebook based genomic data visualization toolkit.
Language:Python00
notion-scholar
Reference management solution using Python and Notion.
Language:Python00
paperpile-notion
CLI & GitHub Workflow based one-way sync from Paperpile to Notion
Language:TypeScript00
paperpile-to-notion
Language:TeX00
SEACells
SEACells algorithm for Inference of transcriptional and epigenomic cellular states from single-cell genomics data
Language:Jupyter Notebook00
single-cell-primers
Primers for single-cell data analysis
Language:Jupyter Notebook00
notion-scholar
Reference management solution using Python and Notion.
Language:Python14923
SEACells
SEACells algorithm for Inference of transcriptional and epigenomic cellular states from single-cell genomics data
Language:Jupyter Notebook14226
atac_metacell_utilities
Snakemake pipeline for scATAC metacell utilities such as primed and lineage specific scores, chromVAR, in-silico ChIP
Language:Python40

jordanc17/paperpile-to-notion
Language:TeX
jordanc17/SEACells
SEACells algorithm for Inference of transcriptional and epigenomic cellular states from single-cell genomics data
Language:Jupyter Notebook
jordanc17/single-cell-primers
Primers for single-cell data analysis
Language:Jupyter Notebook
jordanc17/AdaptiveKDE
Python module for adaptive kernel density estimation
Language:Python
jordanc17/CoolBox
Jupyter notebook based genomic data visualization toolkit.
Language:Python
jordanc17/notion-scholar
Reference management solution using Python and Notion.
Language:Python
jordanc17/paperpile-notion
CLI & GitHub Workflow based one-way sync from Paperpile to Notion
Language:TypeScript