Jordan Lab

The Jordan Lab @ Georgia Tech | Bioinformatics and Computational Genomics

Georgia Institute of Technology

Pinned Repositories

ChocoGen3-Chandeetal-2020
Scripts for Chande et al. 2020. The phenotypic and functional consequences of genomic divergence between admixed Latin American populations: Antioquia and Chocó, Colombia
Language:R0 3 00
GADGET_explore
Source code for the GADGET explore module: https://gadget.biosci.gatech.edu/explore/
Language:R2 3 01
nifH_extract
nifH_extract is a pipeline that retrieves a preliminary database of sequences from using an existing database of nifH genes.
Language:Python0 1 40
pChunk
Rapid, accurate annotations of Plasmids from Illumina NGS reads
Language:R1 2 00
pfgeBLAST
PFGE from raw reads
Language:Python0 3 00
STing
Ultrafast sequence typing and gene detection from NGS raw reads
Language:C++20 4 152
STing_datasets
MLST and other databases for STing
Language:Python1 3 00
stringMLST
Fast k-mer based tool for multi locus sequence typing (MLST)
Language:Python43 8 467
stringMLST_datasets
stringMLST datasets
5 3 50
tagore
The script presents a simple way to visualize features on human chromosome ideograms
Language:Python40 6 79

jordanlab/stringMLST
Fast k-mer based tool for multi locus sequence typing (MLST)
Language:Python43 8 467
jordanlab/tagore
The script presents a simple way to visualize features on human chromosome ideograms
Language:Python40 6 79
jordanlab/STing
Ultrafast sequence typing and gene detection from NGS raw reads
Language:C++20 4 152
jordanlab/stringMLST_datasets
stringMLST datasets
5 3 50
jordanlab/GADGET_explore
Source code for the GADGET explore module: https://gadget.biosci.gatech.edu/explore/
Language:R2 3 01
jordanlab/pChunk
Rapid, accurate annotations of Plasmids from Illumina NGS reads
Language:R1 2 00
jordanlab/STing_datasets
MLST and other databases for STing
Language:Python1 3 00
jordanlab/ChocoGen-TraitMap
Language:HTML0 4 01
jordanlab/ChocoGen3-Chandeetal-2020
Scripts for Chande et al. 2020. The phenotypic and functional consequences of genomic divergence between admixed Latin American populations: Antioquia and Chocó, Colombia
Language:R0 3 00
jordanlab/GADGET_compute
Source code for the GADGET compute module: https://gadget.biosci.gatech.edu/compute/
Language:CSS0 3 00
jordanlab/nifH_extract
nifH_extract is a pipeline that retrieves a preliminary database of sequences from using an existing database of nifH genes.
Language:Python0 1 40
jordanlab/pfgeBLAST
PFGE from raw reads
Language:Python0 3 00
jordanlab/vibriocholera.com
Language:Clarion0 2 00