josefcatala's Stars
johnmyleswhite/ML_for_Hackers
Code accompanying the book "Machine Learning for Hackers"
google/deepvariant
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
scverse/scanpy
Single-cell analysis in Python. Scales to >1M cells.
allisonhorst/stats-illustrations
R & stats illustrations by @allison_horst
mikelove/awesome-multi-omics
List of software packages for multi-omics analysis
zqfang/GSEApy
Gene Set Enrichment Analysis in Python
biocommons/hgvs
Python library to parse, format, validate, normalize, and map sequence variants. `pip install hgvs`
opencb/opencga
An Open Computational Genomics Analysis platform for big data genomics analysis. OpenCGA is maintained and develop by its parent company Zetta Genomics. Please contact support@zettagenomics.com for bug report and feature requests.
arq5x/bedtools-protocols
BU-ISCIII/iskylims
is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.
DominikMueller64/install_R_source
Shell script for install different R-(3.X.X) versions from source.
ML-Bioinfo-CEITEC/ECCB2020
ECCB2020 tutorial: Using Deep Learning For Image and Sequence Analysis
intermine/training-workshops
List of InterMine training workshops and links to repos / materials
babelomics/hipathia
Signaling pathway model
passdan/genesequencepractical
Mini practical session for 11-16 year olds about how we learn about the DNA sequence of genes.
genometra/agilent
An R library to normalize Agilent one color microarray data.