/bdnf-amygdala

analysis done for Wheeler et al 2017

Primary LanguagePython

Need to compare our simple correlation method with:

Some alternative approaches should be considered and/or compared, for example, the single value decomposition approaches or canonical correlation analysis. Please refer to Kang etal 2016 and Bowman etal 2012.

data required

** raw functional data on surface (5 rois) **

/archive/alumni/anne/current/PNC/FC_analysis/func_on_surface_smooth

** surface space ROIs **

/archive/alumni/anne/current/PNC/FC_analysis/CORTEX_masks_txt

** functional data in volume space (amygdala) **

/external/PNC/data/rsfc-awheel/data

** volume space amygdala ROI **

/archive/alumni/anne/current/PNC/FC_analysis/AMY_masks_ns_nii

OR

/archive/alumni/anne/current/PNC/FC_analysis/AMY_masks_ns_resampled_nii ​