Pinned Repositories
phyx
phylogenetics tools for linux (and other mostly posix compliant) computers
BEASTifier
Generate a heap of BEAST xml files for simulation experiments
chronos
ultrametricity or bust
Decisivator
malign
R package for generating emotive feedback
Newick2Nexus
Lightweight program to convert newick tree file(s) to Nexus format.
turboMEDUSA
Fitting of piecewise diversification models to time-calibrated phylogenetic trees.
josephwb's Repositories
josephwb/turboMEDUSA
Fitting of piecewise diversification models to time-calibrated phylogenetic trees.
josephwb/chronos
ultrametricity or bust
josephwb/Newick2Nexus
Lightweight program to convert newick tree file(s) to Nexus format.
josephwb/BEASTifier
Generate a heap of BEAST xml files for simulation experiments
josephwb/Decisivator
josephwb/BayesTraitsV3
Fork of BayesTraits
josephwb/conSTRUCTUREer
Sample SNPs randomly across multiple phylip alignments to construct replicated STRUCTURE input files
josephwb/malign
R package for generating emotive feedback
josephwb/Start_repos
Some tips for noobs on getting started with version control.
josephwb/cladeage
R functions for estimating clade age from the fossil record
josephwb/ES-sim
A simple, simulation-based test for links between diversification rates and continuous traits.
josephwb/gauss-distribution
A fun little project to show distribution of pixels in Gauss's portrait
josephwb/josephwb.github.io
josephwb/Meld2Nexus
Lightweight program to merge alignment files, preserving partition information in Nexus CHARSET format.
josephwb/ncl
Nexus Class Library
josephwb/PhyloTools
A place to put various tools for phylogenetics
josephwb/phytools
josephwb/softwipe
Check and score C/C++ software quality
josephwb/TraceR
Simplified Tracer in R
josephwb/Translogrifier
A lightweight program to remove samples from the results of an MCMC analysis.
josephwb/treemachine
Source tree graph database
josephwb/treePL
Phylogenetic penalized likelihood
josephwb/whalepetunias