Pinned Repositories
EP-KP-transcriptomics
Additional Data for article "Gene expression shifts in the Emperor penguin’s adaptation to the extreme Antarctic environment"
gatk-snp-calling
Full GATK SNP calling pipeline
GenomeAnnotation_Workshop2023
Materials for genome annotation sessions at the 2023 WORKSHOP ON GENOMICS, CESKY KRUMLOV
genomics_adventure
Workshop on Genomics - Genomics Adventure
genotype_plot
A set of functions to visualise genotypes based on a VCF
guppy-colour-polymorphism
Code, scripts and additional data pertaining to "A large and diverse autosomal haplotype is associated with sex-linked colour polymorphism in the guppy"
guppy_genome
Information for the guppy genome
hap-IBD_files
hapIBD test files
interchromLD
Prep and scripts for creating inter-chromosomal LD
popgen-evomics2024
josieparis's Repositories
josieparis/gatk-snp-calling
Full GATK SNP calling pipeline
josieparis/guppy-colour-polymorphism
Code, scripts and additional data pertaining to "A large and diverse autosomal haplotype is associated with sex-linked colour polymorphism in the guppy"
josieparis/popgen-evomics2024
josieparis/EP-KP-transcriptomics
Additional Data for article "Gene expression shifts in the Emperor penguin’s adaptation to the extreme Antarctic environment"
josieparis/GenomeAnnotation_Workshop2023
Materials for genome annotation sessions at the 2023 WORKSHOP ON GENOMICS, CESKY KRUMLOV
josieparis/genomics_adventure
Workshop on Genomics - Genomics Adventure
josieparis/genotype_plot
A set of functions to visualise genotypes based on a VCF
josieparis/guppy_genome
Information for the guppy genome
josieparis/hap-IBD_files
hapIBD test files
josieparis/interchromLD
Prep and scripts for creating inter-chromosomal LD
josieparis/iso-Y-allele-freqs
josieparis/josieparis
josieparis/Morone-americana-genome-assembly-annotation
Genome assembly and annotation of the white perch (Morone americana)