Pinned Repositories
2020-05-19_workshop_template
This repository is designed as a test for a data carpentry workshop
FishingForPlasmids
gatk
Official code repository for GATK versions 4 and up
greenelab.com
The website source code for greenelab.com
Jellyfish
A fast multi-threaded k-mer counter
listeria_source_attribution
ncbi-genome-download
Scripts to download genomes from the NCBI FTP servers
planets
Colonization of the solar system
plascad
Plascad is a computationally efficient tool designed for plasmids classification, antibiotic resistance genes (ARGs) annotation and plasmid visualization.
PlaScope
:microscope: :o: Plasmid exploration of bacterial genomes
jpaganini's Repositories
jpaganini/2020-05-19_workshop_template
This repository is designed as a test for a data carpentry workshop
jpaganini/FishingForPlasmids
jpaganini/gatk
Official code repository for GATK versions 4 and up
jpaganini/greenelab.com
The website source code for greenelab.com
jpaganini/Jellyfish
A fast multi-threaded k-mer counter
jpaganini/listeria_source_attribution
jpaganini/ncbi-genome-download
Scripts to download genomes from the NCBI FTP servers
jpaganini/planets
Colonization of the solar system
jpaganini/plascad
Plascad is a computationally efficient tool designed for plasmids classification, antibiotic resistance genes (ARGs) annotation and plasmid visualization.
jpaganini/PlaScope
:microscope: :o: Plasmid exploration of bacterial genomes
jpaganini/plasmidEC-1
An ensemble of plasmid classification tools
jpaganini/shell-genomics
jpaganini/wrangling-genomics
Data Wrangling and Processing for Genomics