Pinned Repositories
amonghost
auto-hcv
Automated genomic analysis of HCV sequence data
bioconda-recipes
Conda recipes for the bioconda channel.
constellations
covid_html_report
covidclassifier
covidclassifier2
DataDashboardSystem
fibonacci
indelrates
Data and scripts used for HIV-1 group M indel rate estimation project
jpalmer37's Repositories
jpalmer37/amonghost
jpalmer37/auto-hcv
Automated genomic analysis of HCV sequence data
jpalmer37/bioconda-recipes
Conda recipes for the bioconda channel.
jpalmer37/constellations
jpalmer37/covid_html_report
jpalmer37/covidclassifier
jpalmer37/covidclassifier2
jpalmer37/DataDashboardSystem
jpalmer37/fibonacci
jpalmer37/fluflo
Nextflow pipeline for generation of phylogenetic trees to be visualized in Auspice.
jpalmer37/FluViewer
Tool for generating influenza A virus genome sequences from FASTQ data
jpalmer37/genbank-date-parser
Simple Python date parser. Intended for phylogenetic tree dating, such as with LSD2 in IQTree.
jpalmer37/hockey
jpalmer37/jpalmer37
Config files for my GitHub profile.
jpalmer37/modeling-indels
jpalmer37/ncov
Nextstrain build for novel coronavirus SARS-CoV-2
jpalmer37/ncov-tools
Small collection of tools for performing quality control on coronavirus sequencing data and genomes
jpalmer37/nf-core-modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
jpalmer37/nf-core-test
jpalmer37/nf-core-testaws
jpalmer37/nf-core-upcoastv
jpalmer37/pokemon_classifier
jpalmer37/R-introduction
jpalmer37/Roary
Rapid large-scale prokaryote pan genome analysis
jpalmer37/sm_indelrates
Data and scripts used for HIV-1 group M indel rate estimation project
jpalmer37/tools-iuc
Tool Shed repositories maintained by the Intergalactic Utilities Commission
jpalmer37/uofthacks
Our submission for UofT Hacks 2021.
jpalmer37/virscan-toolkit
A collection of scripts attempting to detect and flag cross-reactive peptide hits from VirScan PhIP-Seq outputs.
jpalmer37/withinhost
jpalmer37/youtube-dashboard