/3_UTR

Primary LanguagePython

3_UTR

Predicting 3 UTR end coordinates from the single end RNA seqencing data.

See conda_env.txt to install required tools

Inputs required:

reference genome as .fasta, raw sequencing file.fastq.gz, gene coordinates .gff format

change

Output

.tab file with predicted 3 UTR coordinates

Running the program

./analysis.sh