Pinned Repositories
2018_DS3_tutorial
Tutorial on machine learning for genetics given at the DS3@Polytechnique summer school
apg
Accelerated proximal gradient in R
deepSUQUAN
Extend SUQUAN to deep learning problems
droplasso
Dropout Lasso
Droplasso-experiments
A fusion of the dropout and the lasso penalties used in Single Cell data
GRISLI
GRISLI: Gene Regulation Inference for Single-cell with LInear differential equations and Peanian kernel velocities
kmr
Kernel multitask regression
qmf-genomics
Multiomics data integration with quantile matrix factorization
suquan
Supervised quantile normalization in R
tigress
Trustful Inference of Gene REgulation using Stability Selection
jpvert's Repositories
jpvert/apg
Accelerated proximal gradient in R
jpvert/droplasso
Dropout Lasso
jpvert/qmf-genomics
Multiomics data integration with quantile matrix factorization
jpvert/2018_DS3_tutorial
Tutorial on machine learning for genetics given at the DS3@Polytechnique summer school
jpvert/tigress
Trustful Inference of Gene REgulation using Stability Selection
jpvert/deepSUQUAN
Extend SUQUAN to deep learning problems
jpvert/kmr
Kernel multitask regression
jpvert/suquan
Supervised quantile normalization in R
jpvert/Droplasso-experiments
A fusion of the dropout and the lasso penalties used in Single Cell data
jpvert/GRISLI
GRISLI: Gene Regulation Inference for Single-cell with LInear differential equations and Peanian kernel velocities
jpvert/kmr4toxicogenetics
Code to reproduce the experiments in the paper "Kernel multitask regression for toxicogenetics"
jpvert/jpvert.github.io
Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes
jpvert/LOTUS
LOTUS is an algorithm for cancer driver gene prediction. This page provides in particular codes to reproduce simulation results.
jpvert/NetNorM
jpvert/networks
Reconstruction of Regulatory Networks using Learning Methods
jpvert/singlecellkernel
Positive definite kernel for single-cell RNA-seq data
jpvert/xenopus-atlas
Visualization of spatiotemporal gene expression in Xenopus embryo