jrfaeder
I am Associate Professor of Computational and Systems Biology at the University of Pittsburgh. My group leads the development of RuleBender and BioNetGen.
University of Pittsburgh
Pinned Repositories
BayesianBenchmark
bionetgen
Rule-based modeling framework
BioNetGen_Examples
CellBlender_Models
Repository for CellBlender Models and Examples
cellblender_tutorials
CellBlender Tutorials
cmw2018_installation_instructions
COVID19
Rapid prototyping coalition for SARS-CoV-2 tissue infection dynamics
NIMBioS-Data
Data files from simulations of benchmark model problems
petab-testing
qbio_Textbook
jrfaeder's Repositories
jrfaeder/BioNetGen_Examples
jrfaeder/BayesianBenchmark
jrfaeder/bionetgen
Rule-based modeling framework
jrfaeder/CellBlender_Models
Repository for CellBlender Models and Examples
jrfaeder/cellblender_tutorials
CellBlender Tutorials
jrfaeder/cmw2018_installation_instructions
jrfaeder/COVID19
Rapid prototyping coalition for SARS-CoV-2 tissue infection dynamics
jrfaeder/NIMBioS-Data
Data files from simulations of benchmark model problems
jrfaeder/petab-testing
jrfaeder/qbio_Textbook
jrfaeder/rtd-tutorial
jrfaeder/SNARE
jrfaeder/visualization
jrfaeder/WEBNG---preprint
jrfaeder/WESTPA_Workshop_2018_Saglam
2018 WESTPA Workshop tutorial by Ali Sinan Saglam, uses WESTPA and BioNetGen
jrfaeder/Workshop_2016
Repository for models, descriptions, and code to be used for the 2016 Workshop
jrfaeder/Workshop_2018