jrgant
Epidemiologist interested in computational modeling, causal inference, complex systems, and applied ML. Dual wields pretzel rolls.
Brown University School of Public HealthProvidence, RI
Pinned Repositories
apptainer-mode
Major mode for Apptainer definition files
citeRpackages
Simple function to generate a .bib file of R package citations.
egcmsm_artnet
Code for ARTNet data analysis and network parameterization/simulation
epimodel-netdx-mre
manuscript-org-template
A template for writing manuscripts in Org Mode
manuscript-template
Folder structure for manuscripts
ox-quarto
Org export to Quarto Markdown
quickdag
Build, save, and embed directed acyclic graphs (DAGs)
StatsCompPH-BrownSPH
Statistical Computing Concepts for Public Health Researchers
xgc-msm
Using Agent-based Models to Understand the Epidemiology of Gonorrhea in Men Who Have Sex with Men
jrgant's Repositories
jrgant/quickdag
Build, save, and embed directed acyclic graphs (DAGs)
jrgant/StatsCompPH-BrownSPH
Statistical Computing Concepts for Public Health Researchers
jrgant/egcmsm_artnet
Code for ARTNet data analysis and network parameterization/simulation
jrgant/ox-quarto
Org export to Quarto Markdown
jrgant/xgc-msm
Using Agent-based Models to Understand the Epidemiology of Gonorrhea in Men Who Have Sex with Men
jrgant/epimodel-netdx-mre
jrgant/EpiModelHIV-xgc
EpiModelHIV code used in thesis
jrgant/FluHospPrediction
R package repository to reproduce the flu hospitalization prediction project results
jrgant/manuscript-org-template
A template for writing manuscripts in Org Mode
jrgant/manuscript-template
Folder structure for manuscripts
jrgant/risk-ratio-tutorial
Tutorial and R code for estimating risk ratios using generalized linear models
jrgant/all-the-icons.el
A utility package to collect various Icon Fonts and propertize them within Emacs.
jrgant/apptainer-mode
Major mode for Apptainer definition files
jrgant/gantenmisc
Miscellaneous R functions for fun and profit
jrgant/attractors
Quick visualizations of attractors and other functions
jrgant/EmoryHPC
Tutorials for Using the Emory RSPH HPC for EpiModel Research Lab Researchers
jrgant/EpiABC
Approximate Bayesian Computation for EpiModel on High-Performance Computing Clusters
jrgant/EpiModel-Gallery
Gallery of Network-Based Epidemic Model Templates for EpiModel
jrgant/FluHospPrediction-Manuscript
Code to reproduce the manuscript "Predicting Seasonal Influenza Hospitalizations Using an Ensemble Super Learner: A Simulation Study"
jrgant/jabref
Graphical Java application for managing BibTeX and biblatex (.bib) databases
jrgant/JabRef-Themes
Custom themes for JabRef
jrgant/Machine_Learning_Articles
Collection of articles for the Machine Learning Journal Club
jrgant/neofetch
🖼️ A command-line system information tool written in bash 3.2+
jrgant/NetStats
Sexual Networks of Men Who Have Sex with Men in the United States
jrgant/origami
:game_die: :crystal_ball: Comprehensive Cross-Validation Engine
jrgant/pdf-tools
Emacs support library for PDF files.
jrgant/ser
An R Package with Data Science Tools for SER
jrgant/SILA-AD-Biomarker
SILA was developed by Dr. Betthauser at the University of Wisconsin-Madison to model longitudinal amyloid PET data and estimate individual A+ onset age. This algorithm may have applications in other areas where long-term population trajectories can be surmised from shorter individual longitudinal assessments.
jrgant/sl3
💪🤓 🤔 Modern Super Learning using Pipelines
jrgant/slrep
Replication of Super Learner toy problem from van der Laan and Rose