js21

Pinned Repositories

asmlib
Language:Assembly1 2 01
assembly_improvement
Language:Perl00
Bio-Darkpan-Example
Testing pinto repository
Language:Perl601
Bio-DeSeqExpression
Language:Perl00
Bio-ENA-DataSubmission
Language:Perl00
Bio-GenerateHetSNPAnalysis
Bespoke scripts to back propagate the het snp analysis through all the next gen studies in the PI tracking databases
00
Bio-HPS-FastTrack
Language:Perl00
Bio-Metagenomics
Language:Perl00
Bio-PathPAN-Example
Language:Perl600
kmc
Language:C1 3 01

js21's Repositories

js21/asmlib
Language:Assembly1 2 01
js21/kmc
Language:C1 3 01
js21/assembly_improvement
Language:Perl00
js21/Bio-Darkpan-Example
Testing pinto repository
Language:Perl601
js21/Bio-DeSeqExpression
Language:Perl00
js21/Bio-ENA-DataSubmission
Language:Perl00
js21/Bio-GenerateHetSNPAnalysis
Bespoke scripts to back propagate the het snp analysis through all the next gen studies in the PI tracking databases
00
js21/Bio-HPS-FastTrack
Language:Perl00
js21/Bio-Metagenomics
Language:Perl00
js21/Bio-PathPAN-Example
Language:Perl600
js21/Bio-PI-Utils
Isolated scripts to help my day to day PI tasks
Language:Perl
js21/Bio-RNASeq
The new Sanger Pathogen Informatics RNA Seq analysis pipeline
Language:Perl
js21/Bio-Tradis
Language:Perl
js21/Bio-VertRes-Config
Language:Perl
js21/CPAN-Dark
Manage your own DarkPAN
Language:Perl
js21/Fastaq
Python3 scripts to manipulate FASTA and FASTQ files
Language:Python2 0
js21/mlst_check
Language:Perl
js21/packaging_utils
Utilities to help packaging and maintaining the Debian packages I'm responsible for
Language:Perl
js21/PathFind
Modularised versions of *find scripts
Language:Perl
js21/pipelines_reporting
Language:Perl
js21/setup_tracking
setup a vrtracking pipeline
Language:Perl
js21/vr-codebase
The overall codebase developed and used by the Vertebrate Resequencing group at the Sanger Institute
Language:Perl
js21/vrtrack_crawl
Language:Perl