/diffex

Primary LanguageR

diffex

A shiny tool to view differential expression data:

Input

  • tpm.tsv: a tsv file containing samples (columns) and features (rows), e.g. output from salmon txi$abundance
  • design.tsv: a tsv file containing colData for the experiment (explanatory variables for samples)
  • results.tsv: a tsv file containing the results from deseq2