jsoghigian

Pinned Repositories

blobtoolkit
Interactive quality assessment of genome assemblies
Language:JavaScript84 3 13110
deepconsensus
DeepConsensus uses gap-aware sequence transformers to correct errors in Pacific Biosciences (PacBio) Circular Consensus Sequencing (CCS) data.
Language:Python221 18 6937
compare_genomes
A comparative genomics workflow using Nextflow, conda, Julia and R
Language:Nextflow32 3 205
culicitree
Language:R3 1 00
jsoghigian.github.io
Language:SCSS0 0 00
orthoset_construction
Tools and resources for the construction of ortholog sets usable with the software Orthograph
Language:Shell00
usco_align
Storage for universal ortholog alignment scripts
Language:Python0 0 00
vector-eco-evo
storage for J. Soghigian's misc. scripts and tools
Language:R0 0 00
Inspector
A tool for evaluating long-read de novo assembly results
Language:Python24 2 299

jsoghigian's Repositories

jsoghigian/culicitree
Language:R3 1 00
jsoghigian/jsoghigian.github.io
Language:SCSS0 0 00
jsoghigian/orthoset_construction
Tools and resources for the construction of ortholog sets usable with the software Orthograph
Language:Shell00
jsoghigian/usco_align
Storage for universal ortholog alignment scripts
Language:Python0 0 00
jsoghigian/vector-eco-evo
storage for J. Soghigian's misc. scripts and tools
Language:R0 0 00