jtb324

Pinned Repositories

drive
A cli tool to analyze ibd sharing for a specific locus for multiple phenotypes
Language:Python0 0 00
agd35k_relatedness_QC
Language:WDL0 1 00
CANSYSBIO
A repository for Jupyter Notebooks associated with Vanderbilt's Cancer Systems Biology course
Language:Jupyter Notebook00
ChordDiagram
Chord diagrams for Bokeh
Language:Jupyter Notebook0 0 00
design-resources-for-developers
Curated list of design and UI resources from stock photos, web templates, CSS frameworks, UI libraries, tools and much more
00
ibd_dendrogram
Module to help form the ibd distance matrix and then to draw the dendrogram
Language:Python0 1 00
log
This is a logger that I use for most of my projects. It is just a wrapper around pythons logger
Language:Python00
relatednessFinder
Python tool that allows users to identify the pairwise relatedness between individuals
Language:Python0 1 00
todoist_builder
This is a script to automate adding task from a class to my todoist account
Language:Python1 1 00
WGIBDscan
A cli tool to compare ibd sharing between individuals of interest
Language:Python00

jtb324's Repositories

jtb324/todoist_builder
This is a script to automate adding task from a class to my todoist account
Language:Python1 1 00
jtb324/agd35k_relatedness_QC
Language:WDL0 1 00
jtb324/CANSYSBIO
A repository for Jupyter Notebooks associated with Vanderbilt's Cancer Systems Biology course
Language:Jupyter Notebook00
jtb324/design-resources-for-developers
Curated list of design and UI resources from stock photos, web templates, CSS frameworks, UI libraries, tools and much more
00
jtb324/ibd_dendrogram
Module to help form the ibd distance matrix and then to draw the dendrogram
Language:Python0 1 00
jtb324/log
This is a logger that I use for most of my projects. It is just a wrapper around pythons logger
Language:Python00
jtb324/relatednessFinder
Python tool that allows users to identify the pairwise relatedness between individuals
Language:Python0 1 00
jtb324/WGIBDscan
A cli tool to compare ibd sharing between individuals of interest
Language:Python00
jtb324/doom
Language:Emacs Lisp
jtb324/DRIVE_beta_rc1
This is a repository for working on turning the MEGA project into a commandline tool
Language:Python
jtb324/EPF_Fetcher
Language:Python1 1
jtb324/frequency_webscrapper
Language:Python
jtb324/gnomAD-Allele-Frequency-Fetcher
Program to fetch the allele frequencies of specified variants from GnomAD
Language:Python1 0
jtb324/gnomad_python_api
🧬 That gnomAD Python API (batch script) can be used to obtain data from gnomAD (genome aggregation database)
jtb324/go_mega_probe_converter
A cli helper to get chromosome positions and other chromosome information using the gnomAD api
Language:Go
jtb324/IBDCluster
A cli tool to analyze ibd sharing for a specific locus for multiple phenotypes
Language:Python1
jtb324/linux_configs
Language:Vim Script1 0
jtb324/matching
python package to perform case control matching
Language:Python
jtb324/material-awesome
Material and Mouse driven config for AwesomeWM 4.3
Language:Lua
jtb324/mega_variants_aggregator
cli tool to quickly gather all missense/nonsense variants associated with genes of interest
Language:Python
jtb324/open-source-cs
Video discussing this curriculum:
jtb324/PRScs
Polygenic prediction via continuous shrinkage priors
Language:Python0 0
jtb324/pyCircos
python Circos
Language:Jupyter Notebook
jtb324/PyVCF3
A Variant Call Format reader for Python.
jtb324/qqman
Draws Manhattan plot and QQ plot using plink assoc output.
jtb324/qqman-test
An R package for creating Q-Q and manhattan plots from GWAS results
Language:R
jtb324/ScholarWebscrapper
This is a repository to work on webscraping and create a CLI that can search scholarly journals
Language:Python
jtb324/vawk
An awk-like VCF parser
Language:Python
jtb324/wallpapers
jtb324/workflowr
Organize your project into a research website