Pinned Repositories
3D-Atom-Segmentation
Package to use 3D UNets for Improving Atomic Resolution Electron Tomograms
AreTomo2
Automated-Tomography
DM Script to Semi-Automate Tomography Experiments on S/TEM Microscopes.
elements
Multi-Modal-2D-Data-Fusion
2D Fused Multi-Modal Electron Microscopy (DOI: 10.1038/s41524-021-00692-5)
projection_refinement
A GPU and CPU accelerated python package for aligning tomography datasets.
Removing-Stripe-Artifacts
Removing Scratches, Stripes, and Curtaining Artifacts in Micrographs
Segment_Volume
Python Jupyter-Notebook GUI for Segmenting Tomography Volumes
SuperResolution_EECS_598_Project
Implementations of deep learning models applied on super-resolution for Deep Learning for Computer Vision Project (EECS 598)
tomo_TV
C++ library for Regularized 2D and 3D Tomography Reconstructions.
jtschwar's Repositories
jtschwar/tomo_TV
C++ library for Regularized 2D and 3D Tomography Reconstructions.
jtschwar/Removing-Stripe-Artifacts
Removing Scratches, Stripes, and Curtaining Artifacts in Micrographs
jtschwar/projection_refinement
A GPU and CPU accelerated python package for aligning tomography datasets.
jtschwar/Multi-Modal-2D-Data-Fusion
2D Fused Multi-Modal Electron Microscopy (DOI: 10.1038/s41524-021-00692-5)
jtschwar/3D-Atom-Segmentation
Package to use 3D UNets for Improving Atomic Resolution Electron Tomograms
jtschwar/SuperResolution_EECS_598_Project
Implementations of deep learning models applied on super-resolution for Deep Learning for Computer Vision Project (EECS 598)
jtschwar/Automated-Tomography
DM Script to Semi-Automate Tomography Experiments on S/TEM Microscopes.
jtschwar/elements
jtschwar/Segment_Volume
Python Jupyter-Notebook GUI for Segmenting Tomography Volumes
jtschwar/AreTomo2
jtschwar/astra-toolbox
ASTRA Tomography Toolbox for Custom Reconstruction Scripts
jtschwar/Classifying-Crystal-Symmetry-with-Deep-Learning
Attempt for the 2020 Smokey Mountain Data Challenge (https://smc-datachallenge.ornl.gov/challenge-2-2020/)
jtschwar/DART_python
DART (Discrete Algebric Reconstruction Technique) iterative reconstruction algorithm for discrete tomography.
jtschwar/cryoet-deepfinder
Personal Adaptation of DeepFinder for CryoET
jtschwar/jtschwar.github.io
A Theme for GitHub Pages
jtschwar/prismatic
C++/CUDA package for parallelized simulation of image formation in Scanning Transmission Electron Microscopy (STEM) using the PRISM and multislice algorithms
jtschwar/pytom-template-matching-gpu
Only GPU template matching from the PyTOM toolbox - Used For CZI
jtschwar/tomviz
Cross platform, open source application for the processing, visualization, and analysis of 3D tomography data