Pinned Repositories
aind-sudoku-project
Artificial Intelligence Nanodegree - Introductory Project: Diagonal Sudoku Solver
crud-restaurants
App with python Base http webserver and CRUD integration of an sqlite local database
deBruijn-dna-assembly
Aligner for DNA short sequences by creating deBrujin graphs
demultiplex-fastq
script for demultiplexing pool of samples from fastq files
holiWorld
VS Code HelloWorld Extension
jupyterlab-lsf
📙 Run jupyter lab in an LSF host and map its port
ipssm
Molecular International Prognostic Scoring System IPSS-M for Myelodysplastic Syndromes
ipssm-api
API and CLI for IPSS-M
isabl_cli
🤖 isabl Command Line Client and SDK.
toil_container
:whale: Toil + Docker and Singularity.
juanesarango's Repositories
juanesarango/holiWorld
VS Code HelloWorld Extension
juanesarango/strika-app
CS 5412 First Prototypes for a video-based fitness training app.
juanesarango/deBruijn-dna-assembly
Aligner for DNA short sequences by creating deBrujin graphs
juanesarango/jupyterlab-lsf
📙 Run jupyter lab in an LSF host and map its port
juanesarango/x-graph
Tool to draw nodes of entrepreunership networking contacts and partners.
juanesarango/ALLSorts
ALLSorts is a B-Cell Acute Lymphoblastic Leukemia (B-ALL) subtype classifier. From gene expression counts to over 18 subtypes.
juanesarango/Bash-Oneliner
A collection of handy Bash One-Liners and terminal tricks for data processing and Linux system maintenance.
juanesarango/bayestme
BayesTME: A reference-free Bayesian method for analyzing spatial transcriptomics data
juanesarango/bioinformatics-course
Coding Exercises done for the Bioinformatics Specialization in Coursera
juanesarango/blog-scrapper
🕷basic scrapper to get web-archive content
juanesarango/bsub
python wrapper to submit jobs to bsub (and later qsub)
juanesarango/cart-dht
A sharded Distributed Hash Table (DHT) implementation for a Shopping Cart service
juanesarango/django-rest-framework-filters
Better filtering for Django REST Framework
juanesarango/flowbite
The most popular library of interactive components built with Tailwind CSS
juanesarango/galai
Model API for GALACTICA
juanesarango/Germline-StructuralV-nf
Germline structural variant calling pipeline for short read WGS datasets
juanesarango/gGnome
R API for browsing, analyzing, and manipulating reference-aligned genome graphs in a GenomicRanges framework
juanesarango/igv-reports
Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.
juanesarango/jigv
igv.js standalone page generator and automatic configuration to view bam/cram/vcf/bed. "working in under 1 minute"
juanesarango/juanesarango
My public Github Profile
juanesarango/komputer-maschine
A script that gets your machine ready for development.
juanesarango/nf-bayestme
nextflow script to run bayesTME pipeline
juanesarango/python3.8
juanesarango/rep-net-model
Colab Notebook with pre-trained RepNet model, to predict repetition rate in video.
juanesarango/slider
Vue 3 slider component with multihandles, tooltips merging and formatting (+Tailwind support).
juanesarango/soccer-images
App to use an image recognition API to detect images related with soccer games and fields
juanesarango/stable-diffusion
juanesarango/strika-stream
Implementation to support video streaming and processing on cloud services
juanesarango/strika-webrtc-client
PeerJS WebRTC Client side
juanesarango/toil
A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.