Pinned Repositories
argpass
binary-hamming-dist
NA-agnostic pairwise Hamming distance of binary data
bioconda-recipes
Conda recipes for the bioconda channel.
coreutils
Cross-platform Rust rewrite of the GNU coreutils
genomics-course-docker
genomics-course-docker-GUI-apps
git
Git Source Code Mirror - This is a publish-only repository but pull requests can be turned into patches to the mailing list via GitGitGadget (https://gitgitgadget.github.io/). Please follow Documentation/SubmittingPatches procedure for any of your improvements.
HHS
Hungry-Hungry SNPos
PoF
Probability of Failure for metabolic networks
TB-AMR-CNN
Convolutional Neural Network to predict antibiotic resistance from M. tuberculosis sequence data; inspired by https://github.com/aggreen/MTB-CNN with the main difference of being independent of input dimensions; implemented in TensorFlow
julibeg's Repositories
julibeg/PoF
Probability of Failure for metabolic networks
julibeg/HHS
Hungry-Hungry SNPos
julibeg/TB-AMR-CNN
Convolutional Neural Network to predict antibiotic resistance from M. tuberculosis sequence data; inspired by https://github.com/aggreen/MTB-CNN with the main difference of being independent of input dimensions; implemented in TensorFlow
julibeg/argpass
julibeg/binary-hamming-dist
NA-agnostic pairwise Hamming distance of binary data
julibeg/bioconda-recipes
Conda recipes for the bioconda channel.
julibeg/coreutils
Cross-platform Rust rewrite of the GNU coreutils
julibeg/genomics-course-docker
julibeg/genomics-course-docker-GUI-apps
julibeg/git
Git Source Code Mirror - This is a publish-only repository but pull requests can be turned into patches to the mailing list via GitGitGadget (https://gitgitgadget.github.io/). Please follow Documentation/SubmittingPatches procedure for any of your improvements.
julibeg/heartage
NHSC Heart age tool
julibeg/MTB-CNN
CNN models for antibiotic resistance prediction in M. tuberculosis genomes. From Green & Yoon et al (forthcoming)
julibeg/pandas
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
julibeg/pingouin
Statistical package in Python based on Pandas
julibeg/polars
Fast multi-threaded, hybrid-out-of-core query engine focussing on DataFrame front-ends
julibeg/pv-feedstock
A conda-smithy repository for pv.
julibeg/pyseer
SEER, reimplemented in python 🐍🔮
julibeg/qmplot
A Python package for creating high-quality manhattan and Q-Q plots from GWAS results.
julibeg/scikit-learn
scikit-learn: machine learning in Python
julibeg/staged-recipes
A place to submit conda recipes before they become fully fledged conda-forge feedstocks
julibeg/tb-ml-containers
Docker containers for use in https://github.com/jodyphelan/tb-ml
julibeg/tbhgvs
julibeg/vcf-toy-data
minimal VCF toy dataset
julibeg/who2tbp
A script to convert WHO MTB resistant variants to a format that can be ingested by TBProfiler
julibeg/xxh-plugin-prerun-core
xxh wrappers for core tools: xxh-sudo, xxh-screen