Pinned Repositories
ads1-notebooks
Copies of notebooks used in the practical sessions for Algorithms for DNA Sequencing
annotation_related
short scripts related with annotation, alignments, etc
aws-batch-genomics
Software sets up and runs an genome sequencing analysis workflow using AWS Batch and AWS Step Functions.
aws-genomics-workflows
Genomics Workflows on AWS
Azimuth
Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency
Blast2Bam
Blast2Bam uses the XML results of Blastn, the reference and the fastQ or fasta file(s) to output a SAM file.
Complete-Python-3-Bootcamp
Course Files for Complete Python 3 Bootcamp Course on Udemy
Count_split_reads
Count the exon-exon junction split reads from RNA seq data
data-analysis-with-databricks-sql
dbSNP_information
junyu-boston's Repositories
junyu-boston/Blast2Bam
Blast2Bam uses the XML results of Blastn, the reference and the fastQ or fasta file(s) to output a SAM file.
junyu-boston/data-analysis-with-databricks-sql
junyu-boston/deep-learning-genomics-primer
Contains files for the deep learning in genomics primer.
junyu-boston/devops-capstone-project
devops capstone
junyu-boston/dicerna-rnaseq
Dicerna-RNA SEQ pipeline based on nf-core
junyu-boston/exercise
junyu-boston/fetchngs
Pipeline to fetch metadata and raw FastQ files from public and private databases
junyu-boston/fucking-algorithm
刷算法全靠套路，认准 labuladong 就够了！English version supported! Crack LeetCode, not only how, but also why.
junyu-boston/html-for-programmers-4360013
This is a repository for the LinkedIn Learning course HTML for Programmers
junyu-boston/it-cert-automation-practice
Google IT Automation with Python Professional Certificate - Practice files
junyu-boston/junyu-boston
Config files for my GitHub profile.
junyu-boston/machine-learning-engineering-for-production-public
Public repo for DeepLearning.AI MLEP Specialization
junyu-boston/miRNA_models
junyu-boston/nextflow-infra
AWS CloudFormation templates for deploying Nextflow infrastructure
junyu-boston/nf-core-galxc
junyu-boston/nfcore_testpipeline
A small example pipeline used to test new nf-core infrastructure and common code.
junyu-boston/nodejs-ex
node.js example
junyu-boston/practical-mlops-book
[Book-2021] Practical MLOps O'Reilly Book
junyu-boston/recipes-regression-template
Template repo for kickstarting recipes for regression use case
junyu-boston/ReLSO-Guided-Generative-Protein-Design-using-Regularized-Transformers
a Transformer-based neural network for generating highly optimized protein sequences called Regularized Latent Space Optimization (RELSO)
junyu-boston/reproducible_R
A reproducible R project
junyu-boston/rnaseq
RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.
junyu-boston/rnasplice
rnasplice is a bioinformatics pipeline for RNA-seq alternative splicing analysis
junyu-boston/scikit-learn
scikit-learn: machine learning in Python
junyu-boston/serverless-guestbook
junyu-boston/sklearn-project-template
Machine learning template for projects based on sklearn library.
junyu-boston/test-pytorch
IBM pytorch class
junyu-boston/TransAT
TransAT is a package within the R programming language for converting RefSeq ID to Ensembl transcripts and mapping the genomic position, followed by providing variant allele frequencies and gene annotations.
junyu-boston/workshop-ncbi-data-with-python
junyu-boston/xzceb-flask_eng_fr
flask_enf_fr