jvandinter
Bioinformatician in the van Heesch lab at the Princess Maxima Center for Pediatric oncology
@princessmaximacenterUtrecht, The Netherlands
Pinned Repositories
container_pilot
pilot pipeline that includes tool containerization
Cornel_et_al_2023
Code for Cornel et al., Submitted (2023)
dockerfiles
Keeps track of all docker images I have created for our pipelines
MitoCallPipeline
A pipeline for mitochondrial mutation calling
ORFquant
An R package for Splice-aware quantification of translation using Ribo-seq data
palomar-siles_et_al_2022
riboseq_initial_check
All up-to-date pipelines in a single location
RiboseQC
Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.
rms_analysis
Code used for the analysis of rhabdomyosarcoma samples
nf_ribo_pipeline
jvandinter's Repositories
jvandinter/MitoCallPipeline
A pipeline for mitochondrial mutation calling
jvandinter/container_pilot
pilot pipeline that includes tool containerization
jvandinter/Cornel_et_al_2023
Code for Cornel et al., Submitted (2023)
jvandinter/dockerfiles
Keeps track of all docker images I have created for our pipelines
jvandinter/ORFquant
An R package for Splice-aware quantification of translation using Ribo-seq data
jvandinter/palomar-siles_et_al_2022
jvandinter/riboseq_initial_check
All up-to-date pipelines in a single location
jvandinter/RiboseQC
Pipeline for Quality Control of Ribo-Seq data, selection of P-site offsets, and codon usage statistics.
jvandinter/rms_analysis
Code used for the analysis of rhabdomyosarcoma samples