k-wavy

k-wavy's Stars

• huggingface/peft

  🤗 PEFT: State-of-the-art Parameter-Efficient Fine-Tuning.

  Language:Python16.9k1.7k

• microsoft/LoRA

  Code for loralib, an implementation of "LoRA: Low-Rank Adaptation of Large Language Models"

  Language:Python11.1k698

• RSCJacksonLab/local-ancestral-sequence-embeddings

  Language:Jupyter Notebook5

• fhalab/MLDE

  A machine-learning package for navigating combinatorial protein fitness landscapes.

  Language:Python12326

• OATML/bdl-benchmarks

  Bayesian Deep Learning Benchmarks

  Language:Jupyter Notebook66594

• OATML/RHO-Loss

  Language:Python19417

• OATML/EVE

  Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Joint collaboration between the Marks lab and the OATML group.

  Language:Python6354

• OATML-Markslab/EVE

  Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Joint collaboration between the Marks lab and the OATML group.

  Language:Python16135

• dina-lab3D/OpsiGen

  Language:Python3

• benderb1/rosettagpcr

  Model database and methods for generating models of GPCRs using Rosetta

  Language:Python42

• ccsb-scripps/AutoDock-Vina

  AutoDock Vina

  Language:C++645218

• FabianLiessmann/RosettaGPCRPocketSize

  RosettaGPCR constraint file generation for optimized pocket representation in inactive class A GPCRs

  Language:Python3

• YoshitakaMo/localcolabfold

  ColabFold on your local PC

  Language:Python633141

• IndexThePlanet/Logan

  Logan Unitigs and Contigs

  1113

• MiguelArenas/proteinevolver

  Automatically exported from code.google.com/p/proteinevolver

  Language:C42

• MaximePolicarpo/Opsins_RayFinnedFishes

  Evolution of visual and non-visual opsins in ray-finned fishes.

  Language:R11

• argonne-lcf/ai-science-training-series

  Language:Jupyter Notebook212632

• VisualPhysiologyDB/visual-physiology-opsin-db

  A database of opsin genotype-phenotype data and machine-learning models trained to predict opsin phenotypes.

  Language:Jupyter Notebook52

• facebookresearch/esm

  Evolutionary Scale Modeling (esm): Pretrained language models for proteins

  Language:Python3.4k659

• evolutionaryscale/esm

  Language:Python1.6k177

• galaxyproject/galaxy

  Data intensive science for everyone.

  Language:Python1.4k1k

• stephaneguindon/phyml

  PhyML -- Phylogenetic estimation using (Maximum) Likelihood

  Language:C18061

• ecwheele/CSHL_singlecellanalyses_2018

  Language:Jupyter Notebook67

• niemasd/TreeSAP

  TreeSAP: Tree SAmpling under Phylogenetic models

  Language:Python4

• Zsailer/pyasr

  Ancestral Sequence Reconstruction in Python

  Language:Python128

• omicsEye/deepbreaks

  deepBreaks , a computational method, aims to identify important changes in association with the phenotype of interest using multi-alignment sequencing data from a population.

  Language:Jupyter Notebook93

• johnrgilbert/CS111-2023-winter

  Language:Jupyter Notebook214

• rambaut/figtree

  Automatically exported from code.google.com/p/figtree

  Language:Java403109

• globalbioticinteractions/globalbioticinteractions

  Global Biotic Interactions provides access to existing species interaction datasets

  Language:Java12616

• wpeery/WALLE-PCB

  The 2nd Gen PCB for the WALLE Capstone 2018

  Language:SMT1