kalenkovich/biomag2020_depression

Issues

• clean data using the ref channels

  #28 opened 3 years ago by kalenkovich
  0

• Number of channels varies from subject to subject

  #25 opened 3 years ago by levchenkoegor
  1

• skip subjects in `switch_to_BIDS.ipynb` explicitly

  #26 opened 3 years ago by kalenkovich
  0

• calculate vectors of eigenvalues (see Egor's code)

  #22 opened 3 years ago by kalenkovich
  0

• implement k-means on eigenvalue vectors using EMD and EMB barycenters

  #23 opened 3 years ago by kalenkovich
  0

• Try to find bad channels

  #6 opened 4 years ago by kalenkovich
  0

• Replicate biomarkers from article: Multilayer MEG FC for MDD

  #24 opened 4 years ago by levchenkoegor
  0

• Improve preprocessing html reports

  #21 opened 4 years ago by levchenkoegor
  0

• Should we normalize sensors somehow?

  #20 opened 4 years ago by levchenkoegor
  0

• CTF-specific stuff

  #9 opened 4 years ago by kalenkovich
  1

• Create papermill template for preprocessing report

  #5 opened 4 years ago by kalenkovich
  1

• Failed to set marker file for job started

  #19 opened 4 years ago by levchenkoegor
  0

• RuleException: CellTimeoutError

  #18 opened 4 years ago by levchenkoegor
  0

• Make an ultimate report for QA of preprocessing

  #14 opened 4 years ago by levchenkoegor
  0

• Make a preprocessing report rule

  #13 opened 4 years ago by levchenkoegor
  1

• Snakemake: subject-level stuff

  #7 opened 4 years ago by kalenkovich
  1

• HPI - should we account for head movements?

  #10 opened 4 years ago by kalenkovich
  0

• Save notch filter parameters

  #8 opened 4 years ago by kalenkovich
  0

• ICA filenames don't conform to mne-python convection

  #4 opened 4 years ago by kalenkovich
  0

• Swith to using *.ds folder as inputs instead of *.json files

  #3 opened 4 years ago by kalenkovich
  0

• Refactor Snakefile

  #2 opened 4 years ago by kalenkovich
  0

• Save bids folder tree before merge or as a rule

  #1 opened 4 years ago by kalenkovich
  0