karJac
Single-cell multiomics analyses of glioma microenvironment. All of my scripts here are avaible under MIT license.
Nencki Institute of Experimental BiologyWarsaw
Pinned Repositories
CityOfHope
Analysis of immunotherapy effects on mouse GL261 glioblastoma model immunoenvironment.
customCodes
My custom codes
customScripts
scripts by me
CyTOF_NO
Analysis of CD45+ cells from tumor microenvironment of GBM. (CyTOF)
DMRTA2
Analysis of DMRTA2+ cells in human glioblastoma for MM. (scRNA)
immunoEnvOPUS
OPUS project: Effect of popular mutations in GBM on tumor microenvironment.
spacexr
Spatial-eXpression-R: Cell type identification (including cell type mixtures) and cell type-specific differential expression for spatial transcriptomics
tilbrm
tilbrm_dkfz
rstudio
RStudio is an integrated development environment (IDE) for R
decoupleR
R package to infer biological activities from omics data using a collection of methods.
karJac's Repositories
karJac/CityOfHope
Analysis of immunotherapy effects on mouse GL261 glioblastoma model immunoenvironment.
karJac/customCodes
My custom codes
karJac/customScripts
scripts by me
karJac/CyTOF_NO
Analysis of CD45+ cells from tumor microenvironment of GBM. (CyTOF)
karJac/DMRTA2
Analysis of DMRTA2+ cells in human glioblastoma for MM. (scRNA)
karJac/immunoEnvOPUS
OPUS project: Effect of popular mutations in GBM on tumor microenvironment.
karJac/spacexr
Spatial-eXpression-R: Cell type identification (including cell type mixtures) and cell type-specific differential expression for spatial transcriptomics
karJac/tilbrm
tilbrm_dkfz