Pinned Repositories
carlos_gene_plot
cayman
conda-forge-pinning-feedstock
A conda-smithy repository for conda-forge-pinning.
crazy_annotator
crc_meta_shap
Customizable-codenames-grid-generator
dysb_classifier
embl-napari-workshop
FISH_probes
Scripts to design FISH probes for 16S sequences
fluffy-enigma
karchern's Repositories
karchern/carlos_gene_plot
karchern/cayman
karchern/conda-forge-pinning-feedstock
A conda-smithy repository for conda-forge-pinning.
karchern/crazy_annotator
karchern/crc_meta_shap
karchern/Customizable-codenames-grid-generator
karchern/dysb_classifier
karchern/embl-napari-workshop
karchern/FISH_probes
Scripts to design FISH probes for 16S sequences
karchern/fluffy-enigma
karchern/gff_quantifier
karchern/ggquantileplot
karchern/ggstripes
karchern/ggunileg
karchern/tnSeq_essentiality
karchern/tnSeqQC
script to generate a series of plots to interrogate shotgun reads generated in the context of a transposon insertion library
karchern/napari-crop
karchern/napari-read-nd2
karchern/PRISMA-trial
Code exploring the link between the human gut microbiome and kidney transplantation success
karchern/screenshot_documenter
karchern/siamcat
R package for Statistical Inference of Associations between Microbial Communities And host phenoType
karchern/tnseeker
Tnseeker is a pipeline for transposon insertion sequencing (Tn-Seq) analysis. It performs various operations such as read trimming, alignement, and essential gene inference.
karchern/vortex_knight
karchern/ZellerLab.github.io
Website for the Zeller Lab