Pinned Repositories
BAli-Phy
Bayesian co-estimation of phylogenies and multiple alignments via MCMC
bioseq
Common operations on biological sequence data.
CAnDI
scripts to investigate gene tree conflict with gene families
kakapo
A tool to extract and annotate genes from raw RNA-seq reads.
kakapo-example
Example input & configuration files for kakapo.
ncbi-taxonomy-local
Locally-cached NCBI Taxonomy Database for Python
pitcairnia-dr-nrv
popsim
PopG clone and more!
rhea
Cross-platform GUI for molecular evolution enthusiasts.
semblans
A C++ package that enables the bulk retrieval, processing, and assembly of transcriptome datasets
karolisr's Repositories
karolisr/kakapo
A tool to extract and annotate genes from raw RNA-seq reads.
karolisr/ncbi-taxonomy-local
Locally-cached NCBI Taxonomy Database for Python
karolisr/pitcairnia-dr-nrv
karolisr/popsim
PopG clone and more!
karolisr/rhea
Cross-platform GUI for molecular evolution enthusiasts.
karolisr/BAli-Phy
Bayesian co-estimation of phylogenies and multiple alignments via MCMC
karolisr/bioseq
Common operations on biological sequence data.
karolisr/CAnDI
scripts to investigate gene tree conflict with gene families
karolisr/conStruct
method for modeling continuous and discrete population genetic structure
karolisr/CS112-Green-Utilities
CS 112 - Green (Utilities)
karolisr/DtdAnalyzer
karolisr/exonerate
A generic tool for sequence alignment
karolisr/feems
karolisr/kakapo-example
Example input & configuration files for kakapo.
karolisr/semblans
A C++ package that enables the bulk retrieval, processing, and assembly of transcriptome datasets
karolisr/geneious_plugin_attach_aln_to_tree
Attach a Geneious alignment document to the provided Newick tree.
karolisr/kraken2
The second version of the Kraken taxonomic sequence classification system
karolisr/multipledispatch
Multiple dispatch
karolisr/PhyloMill
karolisr/PhyloMill2
PhyloMill2
karolisr/ramanauskas-igic-2021a
Data and Scripts for RNase-based Self-incompatibility in Cacti
karolisr/Rcorrector
Error correction for Illumina RNA-seq reads
karolisr/SIDR-blue-pimp
Additional files for RNase-based Self-incompatibility in Lysimachia monelli (Primulaceae)
karolisr/stable-diffusion-webui
Stable Diffusion Web UI
karolisr/trinityrnaseq
Trinity RNA-Seq de novo transcriptome assembly