Pinned Repositories
CaVEMan
SNV expectation maximisation based mutation calling algorithm aimed at detecting somatic mutations in paired (tumour/normal) cancer samples. Supports both bam and cram format via htslib
cgpBattenberg
Battenberg algorithm and associated implementation script
cgpCaVEManWrapper
Reference implementation of CGP workflow for CaVEMan SNV analysis
dockstore-cgp-irap
Dockerised iRAP for Dockstore.
VAGrENT
A toolset for comparing genomic variants to reference genome annotation to identify potential biological consequences
vcf_flag_modifier
Python application to remove specific flags from VCF files
ensembl-draw
*DEPRECATED* Code to draw images on an Ensembl website
ensembl-draw
Code to draw images on an Ensembl website
ensembl-webcode
The code to run an Ensembl website
frontend
The frontend for the WSI CoGS student portal website
kathryn-beal's Repositories
kathryn-beal/ensembl-draw
Code to draw images on an Ensembl website
kathryn-beal/ensembl-webcode
The code to run an Ensembl website
kathryn-beal/frontend
The frontend for the WSI CoGS student portal website