kdelint
I work on high-throughput functional genetic screening, mostly using CRISPR/Cas9 as a tool. Interests: sgRNA library design and statistical analysis of screens
Amsterdam UMC
Pinned Repositories
Bagel2
BAGEL2 software
CRISPR_library_mapping
Tools and files for mapping sequencing reads to CRISPR libraries
DrugZ
Guidescore
A python function and excel file to calculate guidescores for CRISPR sgRNAs
IsogenicZ
IsogenicZ is an adaptation of the DrugZ software, designed for analysis of parallel isogenic screens
kdelint's Repositories
kdelint/Bagel2
BAGEL2 software
kdelint/CRISPR_library_mapping
Tools and files for mapping sequencing reads to CRISPR libraries
kdelint/DrugZ
kdelint/Guidescore
A python function and excel file to calculate guidescores for CRISPR sgRNAs
kdelint/IsogenicZ
IsogenicZ is an adaptation of the DrugZ software, designed for analysis of parallel isogenic screens