Code associated with participation in the Womanium Online Brain Intensive 2017.
Much of the code is collected from other freely available sources. Below is a list of sources, as well as sites that were helpful for reference during the brain hack.
Generate Docker images with neuroimaging packages: https://github.com/kaczmarj/neurodocker
NIH fMRI Summer Course (fMRI Quality Control videos): https://fmrif.nimh.nih.gov/public/fmri-course/index_html
Data versioning: http://datalad.org/
NeuroStars (StackOverflow for neuroscience): https://neurostars.org/
Uinversity of Toronto Coders Materials: https://uoftcoders.github.io/studyGroup/lessons/
GitHub guides: https://guides.github.com/
Docker tutorial: https://docs.docker.com/get-started/
Jupyter documentation: http://jupyter.org/documentation.html
MRIQC - Hassleless quality control of MRI images: https://poldracklab.github.io/mriqc/
Nipype tutorial: https://miykael.github.io/nipype_tutorial/
Zenodo: https://zenodo.org/account/settings/linkedaccounts/
Semantic versioning: http://semver.org/