/BiDAF-MultiGPU-Fix

Fixing multi-gpu issue with BiDAF

Primary LanguagePython

Bi-directional Attention Flow for Machine Comprehension

0. Requirements

General

  • Python (developed on 3.5.2. Issues have been reported with Python 2!)
  • unzip

Python Packages

  • tensorflow (deep learning library, verified on 1.1.0)
  • nltk (NLP tools, verified on 3.2.1)
  • tqdm (progress bar, verified on 4.7.4)
  • jinja2 (for visaulization; if you only train and test, not needed)

1. Pre-processing

First, prepare data. Donwload SQuAD data and GloVe and nltk corpus (~850 MB, this will download files to $HOME/data):

chmod +x download.sh; ./download.sh

Second, Preprocess Stanford QA dataset (along with GloVe vectors) and save them in $PWD/data/squad (~5 minutes):

python -m squad.prepro

2. Training

The model was trained with NVidia Titan X (Pascal Architecture, 2016). The model requires at least 12GB of GPU RAM. If your GPU RAM is smaller than 12GB, you can either decrease batch size (performance might degrade), or you can use multi GPU (see below). The training converges at ~18k steps, and it took ~4s per step (i.e. ~20 hours).

Before training, it is recommended to first try the following code to verify everything is okay and memory is sufficient:

python -m basic.cli --mode train --noload --debug

Then to fully train, run:

python -m basic.cli --mode train --noload

You can speed up the training process with optimization flags:

python -m basic.cli --mode train --noload --len_opt --cluster

You can still omit them, but training will be much slower.

3. Test

To test, run:

python -m basic.cli

Similarly to training, you can give the optimization flags to speed up test (5 minutes on dev data):

python -m basic.cli --len_opt --cluster

This command loads the most recently saved model during training and begins testing on the test data. After the process ends, it prints F1 and EM scores, and also outputs a json file ($PWD/out/basic/00/answer/test-####.json, where #### is the step # that the model was saved). Note that the printed scores are not official (our scoring scheme is a bit harsher). To obtain the official number, use the official evaluator (copied in squad folder) and the output json file:

python squad/evaluate-v1.1.py $HOME/data/squad/dev-v1.1.json out/basic/00/answer/test-####.json

3.1 Loading from pre-trained weights

NOTE: this version is not compatible with the following trained models. For compatibility, use v0.2.1.

Instead of training the model yourself, you can choose to use pre-trained weights that were used for SQuAD Leaderboard submission. Refer to this worksheet in CodaLab to reproduce the results. If you are unfamiliar with CodaLab, follow these simple steps (given that you met all prereqs above):

  1. Download save.zip from the worksheet and unzip it in the current directory.
  2. Copy glove.6B.100d.txt from your glove data folder ($HOME/data/glove/) to the current directory.
  3. To reproduce single model:
basic/run_single.sh $HOME/data/squad/dev-v1.1.json single.json

This writes the answers to single.json in the current directory. You can then use the official evaluator to obtain EM and F1 scores. If you want to run on GPU (~5 mins), change the value of batch_size flag in the shell file to a higher number (60 for 12GB GPU RAM). 4. Similarly, to reproduce ensemble method:

basic/run_ensemble.sh $HOME/data/squad/dev-v1.1.json ensemble.json

If you want to run on GPU, you should run the script sequentially by removing '&' in the forloop, or you will need to specify different GPUs for each run of the for loop.

Results

Dev Data

EM (%) F1 (%)
single 67.8 77.4

###Dev Data (old) NOTE: These numbers are from v0.2.1.

EM (%) F1 (%)
single 67.7 77.3
ensemble 72.6 80.7

###Test Data (old) NOTE: These numbers are from v0.2.1.

EM (%) F1 (%)
single 68.0 77.3
ensemble 73.3 81.1

Refer to our paper for more details. See SQuAD Leaderboard to compare with other models.

Multi-GPU Training & Testing

Our model supports multi-GPU training. We follow the parallelization paradigm described in TensorFlow Tutorial. In short, if you want to use batch size of 60 (default) but if you have 3 GPUs with 4GB of RAM, then you initialize each GPU with batch size of 20, and combine the gradients on CPU. This can be easily done by running:

python -m basic.cli --mode train --noload --num_gpus 3 --batch_size 20

Similarly, you can speed up your testing by:

python -m basic.cli --num_gpus 3 --batch_size 20