kellijohnson-NOAA

Stock assessment scientist in the Fisheries Resource Analysis and Monitoring Division, NWFSC, NMFS, NOAA

@NOAAGovSeattle, Washington

Pinned Repositories

.github
Files for all repositories within kellijohnson-NOAA
0 1 00
adnuts
An R package for NUTS sampling using ADMB
Language:R0 0 00
alaska
Stock delineation for Pacific cod in the Aleutian Islands and the Gulf of Alaska using population growth rates.
Language:R0 2 20
AR-perf-testing
Investing autocorrelated recruitment deviations in Stock Synthesis
Language:Smarty0 6 11
ASAR
DRAFT. Automated Stock Assessment Reporting
Language:R0 0 00
laplace
Laplace approximation for stock synthesis (SS), a statistical-catch-at-age stock assessment software package.
Language:R1 2 01
msamak
Multispecies stock assessment method for alaska
Language:Smarty1 2 00
NMFSReports
Write smart R Markdown reports with these basic and easy funcitons!
Language:R2 1 00
sdmTMB
:earth_americas: An R package for spatial and spatiotemporal GLMMs with TMB
Language:R1 1 00
ss3om
Language:Scheme1 2 01

kellijohnson-NOAA's Repositories

kellijohnson-NOAA/NMFSReports
Write smart R Markdown reports with these basic and easy funcitons!
Language:R2 1 00
kellijohnson-NOAA/sdmTMB
:earth_americas: An R package for spatial and spatiotemporal GLMMs with TMB
Language:R1 1 00
kellijohnson-NOAA/ss3om
Language:Scheme1 2 01
kellijohnson-NOAA/.github
Files for all repositories within kellijohnson-NOAA
0 1 00
kellijohnson-NOAA/adnuts
An R package for NUTS sampling using ADMB
Language:R0 0 00
kellijohnson-NOAA/AR-perf-testing
Investing autocorrelated recruitment deviations in Stock Synthesis
Language:Smarty0 6 11
kellijohnson-NOAA/ASAR
DRAFT. Automated Stock Assessment Reporting
Language:R0 0 00
kellijohnson-NOAA/BrailleR
An add-on package for R primarily aimed at improving access to R for blind users. The package contains tools and functions that will help get a student through their first year statistics course, and probably well beyond it.
Language:HTML00
kellijohnson-NOAA/configuration
Scripts to configure various software
Language:R0 1 10
kellijohnson-NOAA/deploy-bookdown
Example of how to automatically deploy a bookdown-generated static site using GitHub actions.
Language:Dockerfile0 0 00
kellijohnson-NOAA/DHARMa
Diagnostics for HierArchical Regession Models
Language:R0 0 00
kellijohnson-NOAA/FIMS-userscenarios
Documentation of user scenarios to help the design, development, and ease of use of FIMS.
1 0
kellijohnson-NOAA/git-references
Referenece material pushed to git
Language:TeX3 9
kellijohnson-NOAA/kellijohnson-NOAA.github.io
Website for Kelli Johnson's NOAA github account
2 0
kellijohnson-NOAA/Maturity_spline
Spline fitting for maturity data
Language:R0 0
kellijohnson-NOAA/noaa-notebook
Collection of notes about science, R, LaTeX, etc. while working for NWFSC.
Language:TeX2 0
kellijohnson-NOAA/r4kfj
R functions for Kelli Faye Johnson
Language:R2 0
kellijohnson-NOAA/rdoxygen
Create doxygen documentation for R package C++ code
kellijohnson-NOAA/regional-sa-workflows
Summary of regional stock assessment workflows and tools used across the U.S. Fishery Science Centers. Updated as of April 2024
Language:TeX0 0
kellijohnson-NOAA/roxygen2
Generate R package documentation from inline R comments
Language:R0 0
kellijohnson-NOAA/saconvert
Convert stock assessment model input files.
Language:R2 21
kellijohnson-NOAA/sahyperpars
Investigating best practices for estimating hyper parameters in stock assessments
3 0
kellijohnson-NOAA/sandbox
A test bed for trying things out.
kellijohnson-NOAA/scales
Tools for ggplot2 scales
Language:R
kellijohnson-NOAA/SurveyExtents
Develop map views of NOAA CCLME trawl survey extents
Language:R0 0
kellijohnson-NOAA/test-hackathon
Test out the template
Language:Python
kellijohnson-NOAA/tsrelation
R code for estimating relationships between time-series data
Language:R3 01
kellijohnson-NOAA/VAST_simulation_depth
Language:R2 0
kellijohnson-NOAA/whisker
{{mustache}} for R
Language:R1 0
kellijohnson-NOAA/xaringan-FIMS
xaringan theme for FIMS with NMFS branding