kellijohnson-NOAA
Stock assessment scientist in the Fisheries Resource Analysis and Monitoring Division, NWFSC, NMFS, NOAA
@NOAAGovSeattle, Washington
Pinned Repositories
.github
Files for all repositories within kellijohnson-NOAA
adnuts
An R package for NUTS sampling using ADMB
alaska
Stock delineation for Pacific cod in the Aleutian Islands and the Gulf of Alaska using population growth rates.
AR-perf-testing
Investing autocorrelated recruitment deviations in Stock Synthesis
ASAR
DRAFT. Automated Stock Assessment Reporting
laplace
Laplace approximation for stock synthesis (SS), a statistical-catch-at-age stock assessment software package.
msamak
Multispecies stock assessment method for alaska
NMFSReports
Write smart R Markdown reports with these basic and easy funcitons!
sdmTMB
:earth_americas: An R package for spatial and spatiotemporal GLMMs with TMB
ss3om
kellijohnson-NOAA's Repositories
kellijohnson-NOAA/NMFSReports
Write smart R Markdown reports with these basic and easy funcitons!
kellijohnson-NOAA/laplace
Laplace approximation for stock synthesis (SS), a statistical-catch-at-age stock assessment software package.
kellijohnson-NOAA/sdmTMB
:earth_americas: An R package for spatial and spatiotemporal GLMMs with TMB
kellijohnson-NOAA/ss3om
kellijohnson-NOAA/.github
Files for all repositories within kellijohnson-NOAA
kellijohnson-NOAA/adnuts
An R package for NUTS sampling using ADMB
kellijohnson-NOAA/AR-perf-testing
Investing autocorrelated recruitment deviations in Stock Synthesis
kellijohnson-NOAA/ASAR
DRAFT. Automated Stock Assessment Reporting
kellijohnson-NOAA/BrailleR
An add-on package for R primarily aimed at improving access to R for blind users. The package contains tools and functions that will help get a student through their first year statistics course, and probably well beyond it.
kellijohnson-NOAA/configuration
Scripts to configure various software
kellijohnson-NOAA/deploy-bookdown
Example of how to automatically deploy a bookdown-generated static site using GitHub actions.
kellijohnson-NOAA/DHARMa
Diagnostics for HierArchical Regession Models
kellijohnson-NOAA/FIMS-userscenarios
Documentation of user scenarios to help the design, development, and ease of use of FIMS.
kellijohnson-NOAA/git-references
Referenece material pushed to git
kellijohnson-NOAA/kellijohnson-NOAA.github.io
Website for Kelli Johnson's NOAA github account
kellijohnson-NOAA/Maturity_spline
Spline fitting for maturity data
kellijohnson-NOAA/noaa-notebook
Collection of notes about science, R, LaTeX, etc. while working for NWFSC.
kellijohnson-NOAA/r4kfj
R functions for Kelli Faye Johnson
kellijohnson-NOAA/rdoxygen
Create doxygen documentation for R package C++ code
kellijohnson-NOAA/recdevanomaly
Stock assessment methods in the face of anomalous recruitment events
kellijohnson-NOAA/regional-sa-workflows
Summary of regional stock assessment workflows and tools used across the U.S. Fishery Science Centers. Updated as of April 2024
kellijohnson-NOAA/roxygen2
Generate R package documentation from inline R comments
kellijohnson-NOAA/saconvert
Convert stock assessment model input files.
kellijohnson-NOAA/sahyperpars
Investigating best practices for estimating hyper parameters in stock assessments
kellijohnson-NOAA/sandbox
A test bed for trying things out.
kellijohnson-NOAA/SurveyExtents
Develop map views of NOAA CCLME trawl survey extents
kellijohnson-NOAA/tsrelation
R code for estimating relationships between time-series data
kellijohnson-NOAA/VAST_simulation_depth
kellijohnson-NOAA/whisker
{{mustache}} for R
kellijohnson-NOAA/xaringan-FIMS
xaringan theme for FIMS with NMFS branding