I couldn't find where the full workflow for Seurat-to-scDataviz, please let me know, Thanks! Fan

Question

I couldn't find where the full workflow for Seurat-to-scDataviz, please let me know, Thanks! Fan

Closed this issue 4 years ago · 1 comments

For a full workflow for Seurat-to-scDataviz, see the GitHub vignette.

Answer 1 · 2020-11-10T12:18:53.000Z

My apologies for the confusion. This is a new package. There is no lengthy workflow for Seurat-to-scDataviz. You simply have to use the as.SingleCellExperiment() command to convert your Seurat object to an object that can be used with scDataviz.