keyuxi

array_analysis

Snakemake workflow for MiSeq array data processing

array_fitting_tools

CellProfiler-plugins

Community-contributed and experimental CellProfiler modules.

fluidics-control

stand alone controller of automated fluid handling system.

keyuxi.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

MERFISH_analysis

Matlab software for the analysis of MERFISH data and the construction of MERFISH probes.

nnn_analysis

nnn_paper

Code for the paper "High-Throughput DNA melt measurements enable improved models of DNA folding thermodynamics". "NNN" stands for "Not-Nearest-Neighbor"

notebook-scheduler

Schedule RStudio and Jupyter notebooks to run on Sherlock cluster

resolve_analysis

for cell segmentation and other analysis of Resolve data

keyuxi/array_analysis

Snakemake workflow for MiSeq array data processing

keyuxi/array_fitting_tools

keyuxi/CellProfiler-plugins

Community-contributed and experimental CellProfiler modules.

keyuxi/fluidics-control

stand alone controller of automated fluid handling system.

keyuxi/keyuxi.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

keyuxi/MERFISH_analysis

Matlab software for the analysis of MERFISH data and the construction of MERFISH probes.

keyuxi/nnn_analysis

keyuxi/nnn_paper

Code for the paper "High-Throughput DNA melt measurements enable improved models of DNA folding thermodynamics". "NNN" stands for "Not-Nearest-Neighbor"

keyuxi/notebook-scheduler

Schedule RStudio and Jupyter notebooks to run on Sherlock cluster

keyuxi/resolve_analysis

for cell segmentation and other analysis of Resolve data

keyuxi/storm-control

Microscope control software