10x.xml(45): expected =
bony45 opened this issue · 1 comments
bony45 commented
I was trying to run Dropest first time for my 10X data as follow
dropest -V -F -g /lower_bay/home/bony.dekumar/refdata-cellranger-mm10-3.0.0/genes/genes.gtf -c 10x.xml possorted_genome_bam.bam
i also tried running
dropest -V -F -m -g /lower_bay/home/bony.dekumar/refdata-cellranger-mm10-3.0.0/genes/genes.gtf -c 10x.xml possorted_genome_bam.bam
or
I got the following error, I am new to single-cell data analysis.
Version: 0.8.6.
Run: 12/23/2019 10:38:52.
10x.xml(45): expected =
Thanks for the help.
evanbiederstedt commented
There's some error in the file 10x.xml
. I would have to see it to debug.