kipkurui

kipkurui's Stars

• jic-dtool/dtool

  Manage scientific data

  Language:Python16

• akiomiyao/tef

  Transposable Element Finder - Detection of active transposable elements from NGS data

  Language:Perl8

• hugo-toha/toha

  A Hugo theme for personal portfolio

  Language:HTML1k586

• datalad-handbook/book

  Sources for the DataLad handbook

  Language:Python14356

• ENCODE-DCC/long-read-rna-pipeline

  ENCODE long read RNA-seq pipeline

  Language:wdl4413

• jambler24/GenGraph

  A repository for the GenGraph toolkit for the creation and manipulation of graph genomes

  Language:Python5116

• kyclark/bioinformatics_primer

  Bioinformatics with Unix, bash, Make, Python, and parallel

  Language:Python2119

• ENCODE-DCC/rna-seq-pipeline

  Language:Python14061

• biod/sambamba

  Tools for working with SAM/BAM data

  Language:D563105

• OpenScienceMOOC/Module-5-Open-Research-Software-and-Open-Source

  Module 5: Open Research Software and Open Source

  Language:HTML7352

• stencila/dockta

  🐳 A Docker image builder for researchers

  Language:TypeScript12112

• pditommaso/awesome-pipeline

  A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin

  6.2k627

• dasaderi/Lab_CoC_templates

  This repository contains Code of Conduct templates for research laboratories and for science conferences.

  146

• jupyterhub/repo2docker

  Turn repositories into Jupyter-enabled Docker images

  Language:Python1.6k361

• MozillaFestival/open-leaders-6

  Project tracking repo for Mozilla Open Leader 6

  247

• BioinfoNet/LowCostOpenAccess

  This is a resource where people can get information on journals where they can publish at waived or subsidised APC.

  78

• BioinfoNet/Data-mining

  Data mining to discover trends in Open Science in Kenya

  Language:HTML514

• crazyhottommy/pyflow-ChIPseq

  a snakemake pipeline to process ChIP-seq files from GEO or in-house

  Language:Python10239

• BioinfoNet/OpenScienceKE

  Core project repo for OpenScienceKE: Workshops, Hackathons and Meetups

  Language:HTML89

• kundajelab/dragonn

  A toolkit to learn how to model and interpret regulatory sequence data using deep learning.

  Language:Jupyter Notebook25471

• uci-cbcl/DanQ

  A hybrid convolutional and recurrent neural network for predicting the function of DNA sequences

  Language:Groff15571

• daler/pybedtools

  Python wrapper -- and more -- for BEDTools (bioinformatics tools for "genome arithmetic")

  Language:Python302102