How does marginpolish + helen compare to nanopolish?

Question

How does marginpolish + helen compare to nanopolish?

phiweger opened this issue 5 years ago · 2 comments

Hi,

I only found comparisons for racon and medaka, however, the best results I see are from nanopolish, so I wonder how m + h compares to it.

Thanks,
Adrian

Answer 1 · 2019-06-17T21:32:35.000Z

Hi Adrian,

As we don't embed any signal level information, we haven't compared against nanopolish. We are focusing on doing a deep analysis of MP + HELEN against Racon + Medaka first. Then depending on resource availability and necessity, we will compare with nanopolish.

Answer 2 · 2019-07-01T17:23:14.000Z

Hi Adrian,

I'll close this issue for now. Will open it again when we do compare with nanopolish. Please feel free to open this issue if you have any other question.