kishwarshafin/helen

Issues

• helen polish UserWarning on batch size

  #37 opened 3 years ago by lloydlowUOA
  0

• there are no other mammal models other than human?

  #36 opened 3 years ago by xdkong
  2

• Question about model's training data

  #35 opened 4 years ago by huangnengCSU
  2

• torch.set_num_threads error in docker image

  #30 opened 4 years ago by jmkidd
  3

• Only Polish interested sequences

  #34 opened 4 years ago by Yechao94
  3

• wrong script in example Usage in README.md

  #33 opened 4 years ago by li081766
  1

• Exception: process 6 terminated with signal SIGKILL

  #32 opened 4 years ago by utrivedi
  5

• h5 error

  #10 opened 4 years ago by MichelMoser
  21

• Add helen to bioconda.

  #25 opened 4 years ago by xiekunwhy
  5

• How to train a new model with in lab testing data

  #31 opened 4 years ago by yipukangda
  2

• Models for Guppy 3.6

  #22 opened 4 years ago by dominik-handler
  2

• MarginPolish output zero .fa file

  #29 opened 4 years ago by yangxiaofeill
  9

• marginpolish docker stuck at 99%

  #27 opened 4 years ago by MichelMoser
  13

• Are existing models suitable to polish a high heterozygosity plant genome assemblies?

  #26 opened 4 years ago by xiekunwhy
  3

• How to install helen in a gcc4.8 enrivments?

  #28 opened 4 years ago by biozhangzhou
  3

• some problem occurs when evaluating the data of na12878 chromosome 21

  #23 opened 5 years ago by huangnengCSU
  4

• Compatibility with draft assembly from other assemblers

  #19 opened 5 years ago by SHuang-Broad
  3

• Plant species

  #15 opened 5 years ago by Jolvii85
  3

• Issue on stitch.py

  #18 opened 5 years ago by nozabey
  7

• HAC models

  #14 opened 5 years ago by MichelMoser
  17

• margin docker run fail

  #17 opened 5 years ago by lstxmu
  27

• MarginPolish

  #16 opened 5 years ago by reiverjohn
  3

• run call.consensus..py fail

  #11 opened 5 years ago by lstxmu
  40

• output path and filename are not joined properly

  #12 opened 5 years ago by cgjosephlee
  2

• How does marginpolish + helen compare to nanopolish?

  #8 opened 5 years ago by phiweger
  2

• marginPolish option

  #9 opened 5 years ago by MichelMoser
  3

• stitch.py ValueError triggered by contig sequence name

  #6 opened 5 years ago by krobison13
  2