kisungyou/papers

resources related to papers

Codes for papers

This repo contains a set of scripts/packages that are associated with the manuscripts and papers. Please see the list below for introduction to available folders and markdown files within each folder for detailed description.

(03) TopLSM

• A set of R scripts to replicate examples from a manuscript titled "Multiple Latent Spaces Comparison Using Topological Analysis".

(02) CORRbox

• MATLAB library for learning with functional connectivity represented as correlation matrices, which are symmetric positive-definite matrices with unit diagonals. We consider a Riemannian framework to view the space of correlation matrices as a quotient of SPD manifold equipped with AIRM.
• See README.md in the folder for
  • adding the path,
  • the list of available functions, and
  • some examples with our library.
• This library is associated with the following paper:
  You and Park (2022). Geometric learning of functional brain network on the correlation manifold. Scientific Reports.

(01) SPDtoolbox

• MATLAB library to study functional connectivity represented as symmetric postiive-definite (SPD) matrices.
• Algorithms for learning on the SPD manifold are implemented with AIRM and LERM geometries.
• See README.md in the folder for
  • adding the path,
  • the list of available functions, and
  • some examples with our library.
• This library is associated with the following paper:
  You and Park (2021). Re-visiting Riemannian geometry of symmetric positive definite matrices for the analysis of functional connectivity. NeuroImage.