knights-lab/BURST

Issues

• "Illegal Instruction" from conda-installed BURST v1

  #37 opened 2 years ago
  1

• Clarification regarding --db partitions

  #36 opened 3 years ago
  0

• Overlapping hits

  #35 opened 3 years ago
  2

• using burst with NCBI nt database?

  #34 opened 4 years ago
  2

• Out of memory error

  #33 opened 4 years ago
  1

• Binary for Mac

  #32 opened 4 years ago
  1

• Burst allows building of non-functional databases/accelerators from compressed Fasta files

  #31 opened 4 years ago
  5

• MyDB.acx file is empty while make database

  #30 opened 4 years ago
  2

• Support for reading from standard input?

  #29 opened 4 years ago
  3

• What is the -s option?

  #28 opened 4 years ago
  2

• ERROR When Creating a BURST Database out of the NCBI Representative Genomes

  #27 opened 4 years ago
  4

• LCA assignment fails

  #26 opened 4 years ago
  10

• Mac version

  #25 opened 5 years ago
  0

• Burst finding no hits

  #24 opened 4 years ago
  6

• Complexity filter

  #23 opened 5 years ago
  2

• Burst missing alignments that blast finds

  #22 opened 5 years ago
  3

• ERROR when ">" appears in a gene name

  #21 opened 5 years ago
  1

• Strange encoding characters in output file

  #20 opened 5 years ago
  5

• Save unaligned sequences

  #19 opened 5 years ago
  0

• Speed slower than expected

  #18 opened 5 years ago
  4

• DB incompatible error

  #17 opened 5 years ago
  1

• line count error

  #16 opened 5 years ago
  4

• db size

  #15 opened 5 years ago
  3

• Note: N-penalized accelerator not usable for unpenalized alignment

  #14 opened 5 years ago
  1

• alltax.txt format

  #13 opened 5 years ago
  1

• ERROR: DB incompatible with selected queries/identity.

  #12 opened 4 years ago
  1

• Error while building database

  #11 opened 4 years ago
  2

• Support SAM/BlastText formats?

  #10 opened 7 years ago
  1

• Embalmulate gone? No method for condensing b6 into OTU table?

  #9 opened 4 years ago
  1

• Cannot build with SSE<4.1

  #8 opened 4 years ago
  3

• Automate DB creation

  #6 opened 7 years ago
  1

• Windows

  #4 opened 7 years ago
  1

• Make taxcut fractional

  #3 opened 7 years ago
  3

• Support custom scoring matrices

  #2 opened 8 years ago
  0

• Support "local" alignments

  #1 opened 8 years ago
  0