knutdrand/bionumpy-benchmarks

Snakemake workflow for running benchmarks for bionumpy

Snakemake workflow: Bionumpy Benchmarks

[](https://github.com/Knut Rand/bionumpy-benchmarks/actions?query=branch%3Amain+workflow%3ATests)

A Snakemake workflow for running benchmarks for bionumpy

Usage

The usage of this workflow is described in the [Snakemake Workflow Catalog](https://snakemake.github.io/snakemake-workflow-catalog/?usage=Knut Rand%2Fbionumpy-benchmarks).

If you use this workflow in a paper, don't forget to give credits to the authors by citing the URL of this (original) bionumpy-benchmarkssitory and its DOI (see above).

TODO

• Replace Knut Rand and bionumpy-benchmarks everywhere in the template (also under .github/workflows) with the correct bionumpy-benchmarks name and owning user or organization.
• Replace Bionumpy Benchmarks with the workflow name (can be the same as bionumpy-benchmarks).
• Replace <description> with a description of what the workflow does.
• The workflow will occur in the snakemake-workflow-catalog once it has been made public. Then the link under "Usage" will point to the usage instructions if Knut Rand and bionumpy-benchmarks were correctly set.