Pinned Repositories
network-biology-study-group
Notes and code from a network biology study group at UMD.
ANARCI
Antibody Numbering and Antigen Receptor ClassIfication
BioPhi
BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluation (OASis) and an interface for computer-assisted antibody sequence design.
BioPhi-2021-publication
This repository contains scripts, data and jupyter notebooks used to produce the evaluation results in the BioPhi 2021 publication
biophi.dichlab.org
Deployment repository for biophi.dichlab.org
cbcbSEQ
Pipeline for DE in rna-seq
HTShape
Shape analysis of high-throughput data
IgLM
Generative Language Modeling for Antibody Design
qsmooth
Normalization of high-throughput genomics data
SPACE2
Tool for rapid clustering of antibody models by the structure of their CDRs.
kokrah's Repositories
kokrah/HTShape
Shape analysis of high-throughput data
kokrah/cbcbSEQ
Pipeline for DE in rna-seq
kokrah/qsmooth
Normalization of high-throughput genomics data
kokrah/ANARCI
Antibody Numbering and Antigen Receptor ClassIfication
kokrah/BioPhi
BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluation (OASis) and an interface for computer-assisted antibody sequence design.
kokrah/BioPhi-2021-publication
This repository contains scripts, data and jupyter notebooks used to produce the evaluation results in the BioPhi 2021 publication
kokrah/biophi.dichlab.org
Deployment repository for biophi.dichlab.org
kokrah/IgLM
Generative Language Modeling for Antibody Design
kokrah/SPACE2
Tool for rapid clustering of antibody models by the structure of their CDRs.