/ngsqc

Primary LanguagePython

ngsqc

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Fast_QC: fastp, fastqc bamqc: qualimap vcfqc:

Description

three files type: fastq, bam and vcf, we need to use different tools to analysis the quality of files. Fast_QC: it is used to analysis fastq file, include fastp and fastqc bamqc: it is used to analysis bam file, include qualimap vcfqc: it is used to analysis vcf file, include ourseves script.

Note

This project has been set up using PyScaffold 2.5.8. For details and usage information on PyScaffold see http://pyscaffold.readthedocs.org/.