krademaker

campbell-2017

Scripts and data files related to Campbell 2016 paper

CATS

Breast cancer tumor subtype classification using arrayCGH data.

cou11-data-analysis-in-R

A data analysis pipeline for RNA-Seq data in R

detect-breast-cancer-genes

A simple Python script to detect and report breast cancer genes.

essential-snippets

All the snippets that make life just a little easier.

krademaker

Config files for my GitHub profile.

krademaker.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

msc-literature-review

LaTeX files for MSc Bioinformatics literature review project on multimodal single-cell sequencing.

tagmapAnalyseR

tagmapAnalyseR package for transposon integration mapping (TagMap).

cell_type_enrichment_pipeline

krademaker/CATS

Breast cancer tumor subtype classification using arrayCGH data.

krademaker/campbell-2017

Scripts and data files related to Campbell 2016 paper

krademaker/cou11-data-analysis-in-R

A data analysis pipeline for RNA-Seq data in R

krademaker/detect-breast-cancer-genes

A simple Python script to detect and report breast cancer genes.

krademaker/essential-snippets

All the snippets that make life just a little easier.

krademaker/krademaker

Config files for my GitHub profile.

krademaker/krademaker.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

krademaker/msc-literature-review

LaTeX files for MSc Bioinformatics literature review project on multimodal single-cell sequencing.

krademaker/tagmapAnalyseR

tagmapAnalyseR package for transposon integration mapping (TagMap).

krademaker/learning_pyro

Learning to work with Pyro (probabilistic programming language)

krademaker/markdown-cv

a simple template to write your CV in a readable markdown file and use CSS to publish/print it.

krademaker/monte_carlo_linear_classifier

Monte Carlo simulation to optimize a linear classifier.

krademaker/MSc_thesis_DKFZ_reproducibility

Repository for project in Stegle and Bayraktar groups

krademaker/spacexr

Spatial-eXpression-R: Cell type identification (including cell type mixtures) and cell type-specific differential expression for spatial transcriptomics

krademaker/tagmap_hopping

pipeline for tagmentation on local transposon "hopping"

krademaker/umcu_internship

Collection of scripts used during internship at UMC Utrecht

krademaker/VAE

krademaker/zotero-obsidian-workflow