krishnan-Rama

Pinned Repositories

• transpipeline_containerised

  Transpipeline v3: A slurm pipeline that transforms your transcriptome data into actionable insights in a seamless flow!

  Language:Python31

• transFlow

  A nextflow pipeline that transforms your transcriptome data into actionable insights in a seamless flow!

  Language:Python20

• AOP_Database

  An ongoing work in progress that aims to map genomes and RNA-seq data onto a collection of Adverse Outcome Pathway databases to give insights into relative toxicodynamics and pathway conservation.

  Language:Python10

• Otox

  Docker container+python wrapper for comparative protein homology analysis

  Language:Python00

• QSAR

  A collection of useful tools for the pre-processing stages of Quantitative Structure-Activity Relationship (QSAR) modeling and Machine Learning.

  Language:R00

• ToxDock

  Tool for modelling species sensitivity distribution (SSD) using ortholog and funtional domain conservation and relative protein binding affinity.

  Language:C00

• transpipeline

  A slurm pipeline that transforms your transcriptome data into actionable insights in a seamless flow!

  Language:Python00

krishnan-Rama's Repositories