kshakir

Pinned Repositories

CellBender
CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.
Language:Python0 0 00
eqtl_pipeline_terra
scripts for eQTL pipeline in Terra
Language:WDL0 0 00
homebridge-ecowitt
A Homebridge plugin supporting a wide range of Ecowitt sensors
Language:TypeScript0 0 00
htsjdk
A Java API for high-throughput sequencing data (HTS) formats.
Language:Java0 0 00
peer
A factor analysis package
Language:C++0 0 00
rocker-versioned2
Run current & prior versions of R using docker. rocker/r-ver, rocker/rstudio, rocker/shiny, rocker/tidyverse, and so on.
Language:Dockerfile0 0 00

kshakir's Repositories

kshakir/CellBender
CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.
Language:Python0 0 00
kshakir/eqtl_pipeline_terra
scripts for eQTL pipeline in Terra
Language:WDL0 0 00
kshakir/homebridge-ecowitt
A Homebridge plugin supporting a wide range of Ecowitt sensors
Language:TypeScript0 0 00
kshakir/htsjdk
A Java API for high-throughput sequencing data (HTS) formats.
Language:Java0 0 00
kshakir/peer
A factor analysis package
Language:C++0 0 00
kshakir/rocker-versioned2
Run current & prior versions of R using docker. rocker/r-ver, rocker/rstudio, rocker/shiny, rocker/tidyverse, and so on.
Language:Dockerfile0 0 00
kshakir/tensorqtl
Ultrafast GPU-enabled QTL mapper
Language:Python0 0 00
kshakir/warp
WDL Analysis Research Pipelines
Language:WDL0 0 00