ards-bootstrap is to kickoff ards project. By default, you will get unanonymized dataset after your run ards-bootstrap
Remember to put cohort-description.csv to this repository before you run shellscript
file should be named as cohort-description.csv and store it in ards-bootstrap directory ./
Moreover, we are cloning private repository. Please add your ssh key to Github UI.
ssh-keygen
cat ~/.ssh/id_rsa.pub
| Patient Unique Identifier | Date when Berlin criteria first met (m/dd/yyyy) | vent_start_time | experiment_group | Pathophysiology | Potential Enrollment |
|---|---|---|---|---|---|
| 00rpi001 | 2047-05-03 17:46:00 | 2022-01-03 07:16:00 | 1 | ARDS | Y |
sh bootstrap.sh
In github workflow, we will run syntax script check everytime you commit to your pull_request