Pinned Repositories
academic-kickstart
Personal website code, built with Hugo Academic
autologs
Automatically create release notes and a changelog.
DHSI2019-git
DHSI 2019 Git Tutorial
flowdash-bio
Workflow Dashboard for Bioinformatics
NCBImeta
Efficient and comprehensive metadata acquisition from the NCBI databases (includes SRA).
ncbitaxonomy2json
Converts the NCBI taxidlineage.dmp file into JSON format.
ncov-recombinant
Reproducible workflow for SARS-CoV-2 recombinant sequence detection.
pixelart
Pixel Art Portfolio
plague-phylogeography
Phylogeography of Yersinia pestis.
slides
Presentation Slides
ktmeaton's Repositories
ktmeaton/ncov-recombinant
Reproducible workflow for SARS-CoV-2 recombinant sequence detection.
ktmeaton/plague-phylogeography
Phylogeography of Yersinia pestis.
ktmeaton/taming-the-beast-2023
Taming the Beast 2023 Coding Space
ktmeaton/advent-of-code-2023
Advent of Code 2023 Challenge
ktmeaton/bevy-bot
Rust learning repositoy for the bevy engine.
ktmeaton/bevy_chess
Follow along of the bevy chess tutorial.
ktmeaton/bioconda-recipes
Conda recipes for the bioconda channel.
ktmeaton/eframe_template
ktmeaton/fastGEAR
fastGEAR Docker Image
ktmeaton/GISAIDR
Programmatically interact with the GISAID database.
ktmeaton/metagenomics_resources
A collection of scripts and databases for metagenomic analysis.
ktmeaton/monkeypox
Nextstrain build for monkeypox virus
ktmeaton/mutation-visualizer
A mutation visualizer built with Rust.
ktmeaton/nf-core-tutorial
A tutorial workspace for learning to use Nextflow and nf-core.
ktmeaton/nf-skyline-dia-ms
ktmeaton/PPanGGOLiN
Build a partitioned pangenome graph from microbial genomes
ktmeaton/range-set-blaze
Integer sets as fast, sorted, integer ranges with full set operations
ktmeaton/rasterize-string
Render a string to a png image with font picking.
ktmeaton/rebar
REcombination BARcode detector.
ktmeaton/rootstock
Clone me to create your Manubot manuscript
ktmeaton/rust-tutorial
ktmeaton/RustConf2024
RustConf2024
ktmeaton/rustconf24-good-turing
ktmeaton/sars-cov-2-vum-phylogeny
How to create a SARS-CoV-2 VUM phylogeny
ktmeaton/sc2rf
SARS-Cov-2 Recombinant Finder for fasta sequences
ktmeaton/sc2ts-paper
ktmeaton/snipit
snipit: summarise snps relative to your reference sequence
ktmeaton/snk
Pipeline management system and CLI generation tool
ktmeaton/the-rust-programming-language
Companion repo for my personal learning with The Rust Programming Language
ktmeaton/wade
WGS Analysis and Detection of Molecular Markers (WADE)