kyclark

biofx_python

Code for Mastering Python for Bioinformatics (O'Reilly, 2021, ISBN 9781098100889)

bioinformatics_primer

Bioinformatics with Unix, bash, Make, Python, and parallel

command-line-rust

Code for Command-Line Rust (O'Reilly, 2024, ISBN 9781098109417)

csvchk

Rust version of csvchk

excel2txt-py

Excel to delimited text (Python version)

make-tutorial

Tutorial on using Makefiles

metagenomics-book

Example code from metagenomics book (https://www.gitbook.com/book/kyclark/metagenomics/details)

new.py

Python program to write new Python programs

sysadminshow

Code for Sysadmin Show Podcast

tiny_python_projects

Code for Tiny Python Projects (Manning, 2020, ISBN 1617297518). Learning Python through test-driven development of games and puzzles.

kyclark/more_tiny_python_projects

Second volume of exercises

kyclark/rust-algorithms

Learning Algorithms in Rust

kyclark/command_line_python

Command-Line Python

kyclark/greweln

Example code

kyclark/idiomatic-rust

🦀 A peer-reviewed collection of articles/talks/repos which teach concise, idiomatic Rust.

kyclark/norvig_ngrams

Python3 port of Peter Norvig's ngrams code

kyclark/rosalind.info

Solutions to rosalind.info problems.

kyclark/rust-csvchk

CSV/Tab check

kyclark/rust-hangman

Rust implementation of Hangman

kyclark/rust-paste

Rust version of paste

kyclark/appetizer

Create the app.json for Stampede

kyclark/biofx_rust

Rosalind challenges in Rust

kyclark/clinicaltrials.gov

Mirror of clinicaltrials.gov

kyclark/ctloader

Clinical Trials XML load in Rust

kyclark/ctweb

Clinical Trials web code

kyclark/elm-imicrobe-spa

kyclark/josephus

Josephus Problem

kyclark/node-imicrobe

Node app server for iMicrobe data

kyclark/planet-microbe-app

Planet Microbe - Semantic search across ‘omics, environmental, and physiochemical data layers.

kyclark/py-grepper

Sort of grep for patterns in files

kyclark/py-physics

Example physics problems in Python

kyclark/pytail

Python tail

kyclark/reversible_py

Find reversible words

kyclark/rust-coins

First Bank of Change in Rust

kyclark/rust-markov

Markov chain in Rust

kyclark/rust-piggie

Rust implementation of Pig Latin transformer

kyclark/rust-rot13

Rust implementation for ROT13

kyclark/rustaceans.org

Backing data for

kyclark/wide2long-py

Convert a wide dataset to long format

kyclark/wordteaser-py

Break phrasesofwordswithoutseparators into words