kylegontjes
4th year PhD Candidate in Microbiology & Immunology at the University of Michigan. Studying carbapenem-resistant Klebsiella pneumoniae in older adults
Snitkin LabAnn Arbor, Mi
Pinned Repositories
demo_bioinf527
For BIOINF527 class activities
codeclub
Snitkin lab code club repository
ISScreener
Runs insertion sequence detection workflow on Illumina WGS data
kylegontjes
Config files for my GitHub profile.
snpkit
Modular workflow for Microbial Variant Calling and SNP diagnostics.
MICRO582-EPI582-Winter-2024
MICRO582/EPI582 - Genomic Epidemiology Winter Course 2022
Team14_Project1
Course project for BIOINF575 2021 Fall Project 1
code_club_curriculum
Curriculum for the Snitkin Lab Code Clubs
snpkit-smk
Snakemake workflow for Microbial Variant Calling, Recombination detection and Phylogenetic tree reconstruction.
kylegontjes's Repositories
kylegontjes/ISScreener
Runs insertion sequence detection workflow on Illumina WGS data
kylegontjes/demo_bioinf527
For BIOINF527 class activities
kylegontjes/codeclub
Snitkin lab code club repository
kylegontjes/kylegontjes
Config files for my GitHub profile.